Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 n-R5s72-201ENSMUST00000104518 119 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm24303-201ENSMUST00000178237 126 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm27286-201ENSMUST00000184934 179 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm42584-201ENSMUST00000201404 220 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm45782-201ENSMUST00000212670 366 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm8613-201ENSMUST00000220383 1077 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
PrkdcP97313 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PrkdcP97313 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Zscan29-202ENSMUST00000110661 5072 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm37457-201ENSMUST00000193639 2433 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm38142-201ENSMUST00000194093 3555 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm22103-201ENSMUST00000116733 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm26475-201ENSMUST00000116769 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm23620-201ENSMUST00000116812 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm25042-201ENSMUST00000116856 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm25540-201ENSMUST00000116880 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm23550-201ENSMUST00000179003 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm25123-201ENSMUST00000179154 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm25353-201ENSMUST00000179366 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm22992-201ENSMUST00000179496 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm25892-201ENSMUST00000179867 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm24092-201ENSMUST00000180257 121 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm43467-201ENSMUST00000197441 437 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC4.49□□□□□ -1.69
PrkdcP97313 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm10095-201ENSMUST00000222765 483 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PrkdcP97313 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PrkdcP97313 AC022682.2-202ENSMUST00000224394 3943 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm5949-201ENSMUST00000213468 1421 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 AC125409.2-201ENSMUST00000221888 2158 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm22636-201ENSMUST00000158142 275 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Mir6367-201ENSMUST00000183385 102 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm37235-201ENSMUST00000195171 59 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm42663-201ENSMUST00000199883 351 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm38036-201ENSMUST00000194586 3564 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 AC127597.1-201ENSMUST00000225697 5711 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm42692-201ENSMUST00000199482 2833 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm42507-201ENSMUST00000201187 2555 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm8692-201ENSMUST00000118102 438 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm13626-201ENSMUST00000119435 402 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm16269-201ENSMUST00000160532 409 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm18430-201ENSMUST00000197534 682 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm18838-201ENSMUST00000204855 886 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm45082-201ENSMUST00000206082 601 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 AC091783.3-201ENSMUST00000223969 681 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PrkdcP97313 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms