Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm15242-201ENSMUST00000122459 283 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm22915-201ENSMUST00000157615 136 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm26025-201ENSMUST00000158655 271 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.11□□□□□ -1.43
H3f3aP84244 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm27001-201ENSMUST00000182252 936 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm21301-201ENSMUST00000189476 699 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm19185-201ENSMUST00000196365 643 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm42464-202ENSMUST00000198111 774 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm3678-201ENSMUST00000218888 492 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
H3f3aP84244 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
H3f3aP84244 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
H3f3aP84244 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Gm13930-201ENSMUST00000118569 368 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Gm15158-201ENSMUST00000120577 570 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Gm12535-201ENSMUST00000121025 484 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Mir8105-201ENSMUST00000184718 89 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm30708-201ENSMUST00000202183 312 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Gm17950-201ENSMUST00000214617 646 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
H3f3aP84244 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.1□□□□□ -1.43
H3f3aP84244 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
H3f3aP84244 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
H3f3aP84244 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
H3f3aP84244 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
H3f3aP84244 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.1□□□□□ -1.43
H3f3aP84244 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.1□□□□□ -1.43
H3f3aP84244 Mir296-201ENSMUST00000083587 79 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms