Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Fdft1P53798 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm14466-201ENSMUST00000119028 451 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Gm12903-201ENSMUST00000121015 544 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm26959-201ENSMUST00000182376 978 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.78□□□□□ -1.32
Fdft1P53798 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.78□□□□□ -1.32
Fdft1P53798 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Fdft1P53798 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm5305-201ENSMUST00000204010 746 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Gm44111-201ENSMUST00000204649 399 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm32899-201ENSMUST00000219694 207 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Fdft1P53798 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.78□□□□□ -1.32
Fdft1P53798 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Fdft1P53798 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Fdft1P53798 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.78□□□□□ -1.32
Fdft1P53798 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Fdft1P53798 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Fdft1P53798 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
Fdft1P53798 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Fdft1P53798 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.77□□□□□ -1.32
Fdft1P53798 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.77□□□□□ -1.32
Fdft1P53798 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Fdft1P53798 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Fdft1P53798 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Mir688-201ENSMUST00000102055 75 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Fdft1P53798 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Fdft1P53798 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm11972-201ENSMUST00000118514 389 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Gm15586-201ENSMUST00000121218 528 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm16284-201ENSMUST00000140995 400 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm22552-201ENSMUST00000157796 337 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Gm17022-201ENSMUST00000166415 922 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Gm23018-201ENSMUST00000177928 109 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Mir7669-201ENSMUST00000183442 58 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm9604-201ENSMUST00000211175 433 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm24451-201ENSMUST00000083353 133 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Fdft1P53798 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Fdft1P53798 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Fdft1P53798 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.77□□□□□ -1.33
Fdft1P53798 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Fdft1P53798 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms