Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.4□□□□□ -1.22
Shmt1P50431 Gm3678-201ENSMUST00000218888 492 ntBASIC7.4□□□□□ -1.22
Shmt1P50431 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.4□□□□□ -1.22
Shmt1P50431 AC173345.3-201ENSMUST00000221245 1093 ntBASIC7.4□□□□□ -1.22
Shmt1P50431 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
Shmt1P50431 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Shmt1P50431 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Shmt1P50431 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Shmt1P50431 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Shmt1P50431 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Shmt1P50431 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.4□□□□□ -1.23
Shmt1P50431 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.4□□□□□ -1.23
Shmt1P50431 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Shmt1P50431 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.4□□□□□ -1.23
Shmt1P50431 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Shmt1P50431 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm37965-201ENSMUST00000195304 1362 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm26143-201ENSMUST00000104480 108 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm13237-201ENSMUST00000122151 635 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm16285-201ENSMUST00000162999 347 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm25617-201ENSMUST00000179548 133 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.39□□□□□ -1.23
Shmt1P50431 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm25617-202ENSMUST00000198387 132 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm44332-201ENSMUST00000203712 433 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm38840-201ENSMUST00000204716 843 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm44849-201ENSMUST00000207595 484 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Gm8667-201ENSMUST00000211112 449 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Gm46231-201ENSMUST00000220152 314 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Shmt1P50431 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Shmt1P50431 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Shmt1P50431 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.39□□□□□ -1.23
Shmt1P50431 Grik1-210ENSMUST00000228034 2708 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Shmt1P50431 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.39□□□□□ -1.23
Shmt1P50431 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Shmt1P50431 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC7.38□□□□□ -1.23
Shmt1P50431 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Shmt1P50431 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Shmt1P50431 Gm11858-201ENSMUST00000117935 838 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm14729-201ENSMUST00000118373 689 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm15741-201ENSMUST00000119401 754 ntBASIC7.38□□□□□ -1.23
Shmt1P50431 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms