Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.95□□□□□ -1.3
HttP42859 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HttP42859 Gm23948-201ENSMUST00000104030 132 ntBASIC6.95□□□□□ -1.3
HttP42859 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
HttP42859 Gm22355-201ENSMUST00000175531 96 ntBASIC6.95□□□□□ -1.3
HttP42859 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm27286-201ENSMUST00000184934 179 ntBASIC6.95□□□□□ -1.3
HttP42859 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.95□□□□□ -1.3
HttP42859 Gm18705-201ENSMUST00000215985 913 ntBASIC6.95□□□□□ -1.3
HttP42859 Gm8863-201ENSMUST00000216630 926 ntBASIC6.95□□□□□ -1.3
HttP42859 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.95□□□□□ -1.3
HttP42859 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.95□□□□□ -1.3
HttP42859 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.95□□□□□ -1.3
HttP42859 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HttP42859 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.95□□□□□ -1.3
HttP42859 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
HttP42859 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HttP42859 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.95□□□□□ -1.3
HttP42859 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC6.95□□□□□ -1.3
HttP42859 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm8317-201ENSMUST00000121261 471 ntBASIC6.95□□□□□ -1.3
HttP42859 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.95□□□□□ -1.3
HttP42859 Gm9320-201ENSMUST00000184151 473 ntBASIC6.95□□□□□ -1.3
HttP42859 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm45608-201ENSMUST00000210948 389 ntBASIC6.95□□□□□ -1.3
HttP42859 Gm45782-201ENSMUST00000212670 366 ntBASIC6.95□□□□□ -1.3
HttP42859 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.95□□□□□ -1.3
HttP42859 AC113031.6-202ENSMUST00000228468 1145 ntBASIC6.95□□□□□ -1.3
HttP42859 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HttP42859 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.95□□□□□ -1.3
HttP42859 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HttP42859 Gm25152-201ENSMUST00000157117 114 ntBASIC6.94□□□□□ -1.3
HttP42859 Gm23894-201ENSMUST00000158107 313 ntBASIC6.94□□□□□ -1.3
HttP42859 Mir7056-201ENSMUST00000183776 59 ntBASIC6.94□□□□□ -1.3
HttP42859 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.94□□□□□ -1.3
HttP42859 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.94□□□□□ -1.3
HttP42859 Gm43212-201ENSMUST00000198208 394 ntBASIC6.94□□□□□ -1.3
HttP42859 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 AV026068-220ENSMUST00000224153 1147 ntBASIC6.94□□□□□ -1.3
HttP42859 AV026068-224ENSMUST00000224827 928 ntBASIC6.94□□□□□ -1.3
HttP42859 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HttP42859 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HttP42859 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.94□□□□□ -1.3
HttP42859 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.94□□□□□ -1.3
HttP42859 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
HttP42859 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.94□□□□□ -1.3
HttP42859 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC6.94□□□□□ -1.3
HttP42859 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HttP42859 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.94□□□□□ -1.3
HttP42859 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
HttP42859 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Gm15560-201ENSMUST00000117107 643 ntBASIC6.94□□□□□ -1.3
HttP42859 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HttP42859 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.94□□□□□ -1.3
HttP42859 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.94□□□□□ -1.3
HttP42859 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HttP42859 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HttP42859 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HttP42859 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HttP42859 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.93□□□□□ -1.3
HttP42859 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Gm26078-201ENSMUST00000104067 128 ntBASIC6.93□□□□□ -1.3
HttP42859 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HttP42859 Gm25942-201ENSMUST00000180080 110 ntBASIC6.93□□□□□ -1.3
HttP42859 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms