Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.07□□□□□ -1.12
Traf1P39428 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Mir760-201ENSMUST00000103257 119 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm14865-201ENSMUST00000117523 494 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm6382-201ENSMUST00000118873 942 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm15242-201ENSMUST00000122459 283 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm22342-201ENSMUST00000122647 298 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.06□□□□□ -1.12
Traf1P39428 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Gm27018-201ENSMUST00000181136 225 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Gm7019-201ENSMUST00000194122 369 ntBASIC8.06□□□□□ -1.12
Traf1P39428 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm19185-201ENSMUST00000196365 643 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm5711-201ENSMUST00000197896 421 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm43084-201ENSMUST00000200696 947 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Traf1P39428 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Traf1P39428 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Traf1P39428 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Traf1P39428 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Traf1P39428 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.06□□□□□ -1.12
Traf1P39428 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Traf1P39428 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.06□□□□□ -1.12
Traf1P39428 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Malat1-201ENSMUST00000172812 6983 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm25093-201ENSMUST00000103993 132 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm24473-201ENSMUST00000104483 131 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm5601-201ENSMUST00000118909 972 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm14353-201ENSMUST00000122200 869 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm24286-201ENSMUST00000157632 128 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm25556-201ENSMUST00000158077 144 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm24155-201ENSMUST00000175259 110 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm37383-201ENSMUST00000191750 745 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gm43212-201ENSMUST00000198208 394 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC8.05□□□□□ -1.12
Traf1P39428 AV026068-218ENSMUST00000223980 575 ntBASIC8.05□□□□□ -1.12
Traf1P39428 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Mir106b-201ENSMUST00000083580 82 ntBASIC8.05□□□□□ -1.12
Traf1P39428 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Traf1P39428 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Traf1P39428 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC8.05□□□□□ -1.12
Traf1P39428 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms