Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm14603-201ENSMUST00000121275 448 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm15096-201ENSMUST00000121918 878 ntBASIC6.8□□□□□ -1.32
Lire1P11260 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.8□□□□□ -1.32
Lire1P11260 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm25180-201ENSMUST00000157746 115 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm8715-201ENSMUST00000162728 531 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.8□□□□□ -1.32
Lire1P11260 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.8□□□□□ -1.32
Lire1P11260 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.8□□□□□ -1.32
Lire1P11260 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.8□□□□□ -1.32
Lire1P11260 Gm27542-201ENSMUST00000184184 256 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm38203-201ENSMUST00000191815 245 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm42824-201ENSMUST00000199361 247 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm43558-201ENSMUST00000200155 210 ntBASIC6.8□□□□□ -1.32
Lire1P11260 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm19764-201ENSMUST00000203630 649 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.8□□□□□ -1.32
Lire1P11260 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.8□□□□□ -1.32
Lire1P11260 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm10145-201ENSMUST00000077776 462 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Lire1P11260 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Lire1P11260 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Lire1P11260 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Lire1P11260 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.79□□□□□ -1.32
Lire1P11260 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.79□□□□□ -1.32
Lire1P11260 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Lire1P11260 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.79□□□□□ -1.32
Lire1P11260 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Lire1P11260 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gm13400-201ENSMUST00000117436 380 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm15129-201ENSMUST00000119673 279 ntBASIC6.79□□□□□ -1.32
Lire1P11260 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gm28142-201ENSMUST00000186899 698 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm29356-201ENSMUST00000186935 373 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm18875-201ENSMUST00000188563 882 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.79□□□□□ -1.32
Lire1P11260 Gm43203-201ENSMUST00000200130 558 ntBASIC6.79□□□□□ -1.32
Lire1P11260 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lire1P11260 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.79□□□□□ -1.32
Lire1P11260 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lire1P11260 Gm18972-201ENSMUST00000218873 630 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm17611-202ENSMUST00000220613 814 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lire1P11260 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gm6887-201ENSMUST00000080945 482 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Mir455-201ENSMUST00000093594 82 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Lire1P11260 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Lire1P11260 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lire1P11260 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.79□□□□□ -1.32
Lire1P11260 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.79□□□□□ -1.32
Lire1P11260 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lire1P11260 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.79□□□□□ -1.32
Lire1P11260 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.78□□□□□ -1.32
Lire1P11260 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms