Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm8464-201ENSMUST00000140208 2200 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm4750-202ENSMUST00000152262 2200 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Arhgef38-203ENSMUST00000161022 1912 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm6368-201ENSMUST00000119727 2147 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Extl2-201ENSMUST00000029575 3000 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Nt5c1b-202ENSMUST00000118657 1792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Lrguk-201ENSMUST00000070189 3058 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 AC164625.1-201ENSMUST00000214034 3036 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Enox2-205ENSMUST00000114918 3226 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Trav9n-4-201ENSMUST00000103626 595 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm24665-201ENSMUST00000104160 129 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm13672-201ENSMUST00000117554 459 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm12851-201ENSMUST00000117920 421 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm14580-201ENSMUST00000119122 718 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm14860-201ENSMUST00000120277 429 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm11765-201ENSMUST00000121173 1205 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm11321-201ENSMUST00000121257 902 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm14990-201ENSMUST00000122354 445 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm12496-201ENSMUST00000154377 668 ntTSL 3 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm23094-201ENSMUST00000157551 322 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm23205-201ENSMUST00000158671 103 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm4252-201ENSMUST00000174823 313 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm23413-201ENSMUST00000175521 125 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Mir5625-201ENSMUST00000176598 80 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm25442-201ENSMUST00000177270 92 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm8266-201ENSMUST00000179745 1192 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm8167-201ENSMUST00000183320 958 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm27522-201ENSMUST00000183949 230 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm5835-201ENSMUST00000185806 1270 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm37822-201ENSMUST00000192618 1109 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm35067-201ENSMUST00000194355 647 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm37929-201ENSMUST00000195116 493 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
Hoxd3P09027 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm44409-201ENSMUST00000198810 166 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm45192-201ENSMUST00000206749 283 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm7751-201ENSMUST00000212868 709 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 4930425K24Rik-201ENSMUST00000222054 2143 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 AC123867.1-201ENSMUST00000224990 816 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 AC166574.2-201ENSMUST00000226751 381 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm5590-201ENSMUST00000059110 345 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm25079-201ENSMUST00000082529 203 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Sytl4-201ENSMUST00000033608 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Cd36-201ENSMUST00000082367 3016 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms