Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm13754-201ENSMUST00000120486 998 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm16113-201ENSMUST00000159629 372 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm17022-201ENSMUST00000166415 922 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm43546-201ENSMUST00000196721 943 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm42713-201ENSMUST00000202709 945 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm45136-201ENSMUST00000205793 943 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm9315-201ENSMUST00000222696 908 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm24451-201ENSMUST00000083353 133 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Mir7b-201ENSMUST00000083557 111 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdc40Q9DC48 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm13196-201ENSMUST00000118297 379 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm22728-201ENSMUST00000158087 129 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm17212-201ENSMUST00000166666 259 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms