Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm27509-201ENSMUST00000102400 79 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm12517-201ENSMUST00000122082 425 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 n-R5s43-201ENSMUST00000122739 110 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm371-201ENSMUST00000142240 1245 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm22763-201ENSMUST00000158374 107 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm20451-201ENSMUST00000173452 273 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Calm5-201ENSMUST00000183198 589 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm28983-201ENSMUST00000186685 614 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm28150-201ENSMUST00000187305 614 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm28723-201ENSMUST00000188640 1001 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm29143-201ENSMUST00000189462 201 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm28377-201ENSMUST00000189695 720 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Ighv1-33-201ENSMUST00000193220 350 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm43198-201ENSMUST00000200927 326 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm19102-201ENSMUST00000201133 553 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm19596-201ENSMUST00000203685 739 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm7482-201ENSMUST00000206446 505 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm20948-201ENSMUST00000211091 449 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 AC133176.1-201ENSMUST00000226668 219 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 AC137902.2-201ENSMUST00000227989 576 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 AC139758.2-201ENSMUST00000228380 529 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm10123-201ENSMUST00000075723 490 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Elobl-202ENSMUST00000082339 300 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm15433-201ENSMUST00000097671 891 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim42Q9D2H5 Gm25502-201ENSMUST00000104428 131 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms