Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm12174-201ENSMUST00000119853 813 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm7599-201ENSMUST00000121453 796 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm16330-201ENSMUST00000128324 297 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm22588-201ENSMUST00000157510 140 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm29383-201ENSMUST00000188284 480 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm44237-201ENSMUST00000205183 936 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Brf1Q8CFK2 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm25724-201ENSMUST00000104531 117 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm11858-201ENSMUST00000117935 838 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm13735-201ENSMUST00000120217 670 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm15096-201ENSMUST00000121918 878 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Mir3473a-201ENSMUST00000175011 78 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm26587-201ENSMUST00000180795 989 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm4042-201ENSMUST00000216946 637 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 A1cf-203ENSMUST00000224400 1204 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 AW822073-201ENSMUST00000075305 555 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Mir296-201ENSMUST00000083587 79 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Gm6679-201ENSMUST00000191467 1869 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Brf1Q8CFK2 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.25□□□□□ -1.09
Brf1Q8CFK2 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms