Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 AC125539.1-201ENSMUST00000227423 622 ntBASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28bQ8CEG5 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Mir697-201ENSMUST00000102316 109 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm14727-201ENSMUST00000118526 525 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm14721-201ENSMUST00000121381 525 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm22562-201ENSMUST00000157334 111 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm17217-201ENSMUST00000166613 469 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm6098-201ENSMUST00000180234 330 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm36928-201ENSMUST00000192466 694 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm37325-201ENSMUST00000194971 694 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm2505-201ENSMUST00000200413 825 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm18960-201ENSMUST00000222962 713 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 AC154506.2-201ENSMUST00000225481 1276 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm10015-201ENSMUST00000072570 465 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28bQ8CEG5 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm12599-201ENSMUST00000120534 792 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm3208-201ENSMUST00000168281 427 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm7200-201ENSMUST00000188426 1163 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm18131-201ENSMUST00000199241 449 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Gm44111-201ENSMUST00000204649 399 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28bQ8CEG5 Robo2-210ENSMUST00000226478 8059 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms