Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 AC155234.1-201ENSMUST00000225610 2823 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Usp40Q8BWR4 Gm37151-201ENSMUST00000194631 5007 ntBASIC9.46□□□□□ -0.89
Usp40Q8BWR4 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Usp40Q8BWR4 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Usp40Q8BWR4 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Usp40Q8BWR4 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Usp40Q8BWR4 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Usp40Q8BWR4 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Usp40Q8BWR4 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm23748-201ENSMUST00000104227 131 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm24781-201ENSMUST00000157636 117 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm25653-201ENSMUST00000158473 138 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm27299-201ENSMUST00000184593 103 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm37576-201ENSMUST00000194228 372 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm10416-201ENSMUST00000197379 645 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm44538-201ENSMUST00000205615 348 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm44982-201ENSMUST00000208795 471 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 AC131743.3-201ENSMUST00000222099 662 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 AC163660.1-201ENSMUST00000223696 818 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Gm43335-201ENSMUST00000198299 3276 ntBASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Usp40Q8BWR4 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm12021-201ENSMUST00000121061 1746 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm1866-201ENSMUST00000120701 477 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm25717-201ENSMUST00000158631 353 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm22523-201ENSMUST00000158696 100 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm20432-201ENSMUST00000173716 250 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm27972-201ENSMUST00000184720 137 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm42443-201ENSMUST00000198084 1155 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm44823-201ENSMUST00000204775 1107 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm7769-201ENSMUST00000212900 933 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Olfr1153-201ENSMUST00000052300 957 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm16123-201ENSMUST00000118647 1517 ntBASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC9.45□□□□□ -0.9
Usp40Q8BWR4 Gm8995-202ENSMUST00000208417 3490 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm45407-201ENSMUST00000209499 3676 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm12135-201ENSMUST00000119170 466 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm23891-201ENSMUST00000158114 138 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm8183-201ENSMUST00000183134 980 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Mir6244-201ENSMUST00000184156 117 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm28023-201ENSMUST00000184556 60 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm27825-201ENSMUST00000184586 60 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm20223-201ENSMUST00000199932 805 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm44911-201ENSMUST00000208436 1062 ntBASIC9.44□□□□□ -0.9
Usp40Q8BWR4 Gm45394-201ENSMUST00000209240 1175 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms