Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm28320-201ENSMUST00000187777 2273 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm13400-201ENSMUST00000117436 380 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm24057-201ENSMUST00000158616 302 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm20690-202ENSMUST00000195126 355 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm38840-201ENSMUST00000204716 843 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm45360-201ENSMUST00000210698 1405 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm45762-201ENSMUST00000212863 2619 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ccdc40Q8BI79 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm14279-201ENSMUST00000117142 332 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm10243-201ENSMUST00000117571 333 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm14465-201ENSMUST00000120603 567 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm25277-201ENSMUST00000157266 324 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm26182-201ENSMUST00000157688 116 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm43390-201ENSMUST00000196614 421 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm43040-201ENSMUST00000202399 558 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm44253-201ENSMUST00000203387 628 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm10247-201ENSMUST00000090395 333 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm44255-201ENSMUST00000203456 2053 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ccdc40Q8BI79 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms