Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm28645-201ENSMUST00000185859 564 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm44306-201ENSMUST00000203058 203 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Clec2j-202ENSMUST00000203658 606 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm18689-201ENSMUST00000203969 902 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm7648-201ENSMUST00000173036 1658 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm2288-201ENSMUST00000118560 638 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm11969-201ENSMUST00000118848 356 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm12825-201ENSMUST00000120249 563 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm12706-201ENSMUST00000121588 698 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm22024-201ENSMUST00000122733 287 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Defa-ps3-201ENSMUST00000142705 282 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm22795-201ENSMUST00000157233 118 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm26070-201ENSMUST00000157500 137 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm25557-201ENSMUST00000158084 315 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm17091-201ENSMUST00000163248 357 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm23945-201ENSMUST00000179609 92 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm7763-201ENSMUST00000182220 1006 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm4891-201ENSMUST00000182279 912 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm5946-201ENSMUST00000182340 970 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm27218-201ENSMUST00000183745 392 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm5147-201ENSMUST00000185999 794 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm29471-201ENSMUST00000190527 700 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm18752-201ENSMUST00000192876 608 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm38337-201ENSMUST00000193986 599 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm37108-201ENSMUST00000194605 626 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm23011-202ENSMUST00000197855 275 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm43005-201ENSMUST00000199015 648 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Trav12-4-201ENSMUST00000200663 271 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm6909-201ENSMUST00000209825 989 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm19987-201ENSMUST00000216339 499 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf4Q6PFF0 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms