Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm5759-201ENSMUST00000119203 811 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm15644-201ENSMUST00000121764 387 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm2735-201ENSMUST00000136133 277 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm15843-201ENSMUST00000146593 529 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm24498-201ENSMUST00000158445 102 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm15795-201ENSMUST00000160969 553 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm19840-201ENSMUST00000169624 882 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm28416-201ENSMUST00000188334 292 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm37349-201ENSMUST00000194205 624 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm37196-201ENSMUST00000194762 906 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm44135-201ENSMUST00000205221 368 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm45497-201ENSMUST00000211701 740 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm5791-201ENSMUST00000220840 489 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm5374-202ENSMUST00000222910 314 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm7493-201ENSMUST00000085919 626 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.28□□□□□ -1.08
Gm28047Q3US59 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Gm28047Q3US59 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Gm28047Q3US59 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.27□□□□□ -1.08
Gm28047Q3US59 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm15385-201ENSMUST00000118725 667 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm12123-201ENSMUST00000120348 472 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm12124-201ENSMUST00000120504 679 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm22342-201ENSMUST00000122647 298 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm23059-201ENSMUST00000158978 107 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm23773-201ENSMUST00000158985 296 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm16558-201ENSMUST00000163015 532 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm20797-201ENSMUST00000177894 383 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm27972-201ENSMUST00000184720 137 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Mir6409-201ENSMUST00000184957 92 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm28341-201ENSMUST00000190883 472 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Trav15d-3-201ENSMUST00000198604 167 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm43659-201ENSMUST00000200894 628 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm44615-201ENSMUST00000206548 358 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm30196-201ENSMUST00000208957 160 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Gm18645-201ENSMUST00000209593 651 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 AC158142.3-201ENSMUST00000226230 675 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.27□□□□□ -1.09
Gm28047Q3US59 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Gm28047Q3US59 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms