Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 AC122346.2-201ENSMUST00000224326 2931 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm15709-201ENSMUST00000118354 213 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm23030-201ENSMUST00000158004 273 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm37475-201ENSMUST00000193107 1015 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm5708-201ENSMUST00000196289 886 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm42753-201ENSMUST00000196718 1268 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm8929-201ENSMUST00000197781 1132 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm3321-201ENSMUST00000200603 1129 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm5418-201ENSMUST00000206932 528 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 AC165155.1-201ENSMUST00000228932 445 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm5514-201ENSMUST00000060477 306 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm21731-201ENSMUST00000079524 489 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Gm45887-201ENSMUST00000212672 2998 ntBASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sf3b2Q3UJB0 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Snora35-201ENSMUST00000104579 128 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm8812-201ENSMUST00000118496 412 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Mup-ps28-201ENSMUST00000120686 289 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm27295-201ENSMUST00000184264 153 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm37295-201ENSMUST00000192186 109 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm37349-201ENSMUST00000194205 624 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 AC154806.5-204ENSMUST00000228900 867 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm2840-201ENSMUST00000048361 411 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Snora21-201ENSMUST00000082967 137 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm44101-201ENSMUST00000203951 2221 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm37496-201ENSMUST00000191930 2509 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Dcdc5-202ENSMUST00000122388 4957 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm18248-201ENSMUST00000191164 1846 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Gm38339-201ENSMUST00000195479 1829 ntBASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Sf3b2Q3UJB0 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 AC093022.3-201ENSMUST00000226569 1926 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 AC132474.1-201ENSMUST00000214407 3686 ntBASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC9.09□□□□□ -0.95
Sf3b2Q3UJB0 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms