Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Gm11298-201ENSMUST00000120503 1799 ntBASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Spg11Q3UHA3 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm16060-201ENSMUST00000153140 478 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm28023-201ENSMUST00000184556 60 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm27825-201ENSMUST00000184586 60 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm44604-201ENSMUST00000205475 496 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm19033-201ENSMUST00000208516 964 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm7768-201ENSMUST00000222988 597 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Gm37813-201ENSMUST00000195003 3695 ntBASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Spg11Q3UHA3 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm42519-201ENSMUST00000199282 3656 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm5752-201ENSMUST00000117771 594 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm6472-201ENSMUST00000178147 651 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm27219-201ENSMUST00000184633 742 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm18447-201ENSMUST00000187501 307 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm6049-201ENSMUST00000222369 458 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm9280-201ENSMUST00000223155 517 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm28581-201ENSMUST00000186086 2177 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm13641-201ENSMUST00000117993 473 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm14335-201ENSMUST00000119165 810 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm14267-201ENSMUST00000119751 496 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm26489-201ENSMUST00000157880 264 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm23995-201ENSMUST00000158060 129 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Mir5107-201ENSMUST00000175586 88 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm35323-201ENSMUST00000191836 499 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm33601-201ENSMUST00000210001 961 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm7802-201ENSMUST00000216464 262 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Gm18103-201ENSMUST00000216621 779 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.39□□□□□ -1.39
Spg11Q3UHA3 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms