Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm22374-201ENSMUST00000104583 132 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm23987-201ENSMUST00000117039 129 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm11896-201ENSMUST00000121105 820 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm26424-201ENSMUST00000122530 104 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm25413-201ENSMUST00000158544 312 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm18397-201ENSMUST00000176704 587 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Mir1892-201ENSMUST00000197752 80 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm4525-201ENSMUST00000198831 254 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col8a1Q00780 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm46191-201ENSMUST00000218899 433 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 AC125543.2-201ENSMUST00000222114 105 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 CT030170.7-201ENSMUST00000223372 103 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm5446-201ENSMUST00000091762 784 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Malat1-201ENSMUST00000172812 6983 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm36938-201ENSMUST00000191612 2696 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm42972-201ENSMUST00000196937 5617 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm14445-201ENSMUST00000117051 1484 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm22284-201ENSMUST00000104132 132 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm12635-201ENSMUST00000117285 752 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm15048-201ENSMUST00000118201 954 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm2288-201ENSMUST00000118560 638 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm12444-201ENSMUST00000121512 877 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm16276-201ENSMUST00000131218 262 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm16026-205ENSMUST00000162923 641 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm15256-201ENSMUST00000177793 883 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm2539-203ENSMUST00000181352 746 ntBASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.41□□□□□ -1.38
Col8a1Q00780 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms