Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CiitaP79621 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
CiitaP79621 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.51□□□□□ -1.21
CiitaP79621 Gm12573-201ENSMUST00000118158 286 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm14531-201ENSMUST00000120845 285 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm16248-201ENSMUST00000124238 243 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.51□□□□□ -1.21
CiitaP79621 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.51□□□□□ -1.21
CiitaP79621 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Gm25989-201ENSMUST00000158761 133 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm23810-201ENSMUST00000175150 74 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Mir5617-201ENSMUST00000176786 57 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm35323-201ENSMUST00000191836 499 ntBASIC7.51□□□□□ -1.21
CiitaP79621 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Gm43849-201ENSMUST00000201086 215 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Gm2767-201ENSMUST00000209582 473 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.51□□□□□ -1.21
CiitaP79621 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.51□□□□□ -1.21
CiitaP79621 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.51□□□□□ -1.21
CiitaP79621 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Mir106b-201ENSMUST00000083580 82 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CiitaP79621 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
CiitaP79621 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Grik1-209ENSMUST00000227986 2942 ntBASIC7.51□□□□□ -1.21
CiitaP79621 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CiitaP79621 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CiitaP79621 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.5□□□□□ -1.21
CiitaP79621 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
CiitaP79621 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CiitaP79621 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
CiitaP79621 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
CiitaP79621 Gm25877-201ENSMUST00000104326 129 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm11501-201ENSMUST00000118039 581 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm11553-201ENSMUST00000120682 240 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm11581-201ENSMUST00000122024 763 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.5□□□□□ -1.21
CiitaP79621 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Gm25722-201ENSMUST00000157498 279 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm24682-201ENSMUST00000158764 137 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Gm5283-201ENSMUST00000177874 334 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm26570-201ENSMUST00000180672 342 ntBASIC7.5□□□□□ -1.21
CiitaP79621 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Gm19185-201ENSMUST00000196365 643 ntBASIC7.5□□□□□ -1.21
CiitaP79621 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm43141-201ENSMUST00000199695 274 ntBASIC7.5□□□□□ -1.21
CiitaP79621 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm8168-201ENSMUST00000209631 948 ntBASIC7.5□□□□□ -1.21
CiitaP79621 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.5□□□□□ -1.21
CiitaP79621 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CiitaP79621 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CiitaP79621 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CiitaP79621 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CiitaP79621 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms