Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Msh6P54276 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm2986-201ENSMUST00000121603 382 ntBASIC8.75□□□□□ -1.01
Msh6P54276 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC8.75□□□□□ -1.01
Msh6P54276 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Gm25722-201ENSMUST00000157498 279 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm25904-201ENSMUST00000158491 143 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.75□□□□□ -1.01
Msh6P54276 Gm3140-201ENSMUST00000163523 481 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Gm9167-201ENSMUST00000182469 962 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm43576-201ENSMUST00000197937 871 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm7166-201ENSMUST00000199715 303 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC8.75□□□□□ -1.01
Msh6P54276 Gm44091-201ENSMUST00000205212 649 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm17908-201ENSMUST00000205552 1256 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm4083-201ENSMUST00000207158 451 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 AC153557.1-201ENSMUST00000217697 403 ntBASIC8.75□□□□□ -1.01
Msh6P54276 AC158750.1-201ENSMUST00000226163 634 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Msh6P54276 AC115760.1-201ENSMUST00000225160 1327 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.75□□□□□ -1.01
Msh6P54276 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.75□□□□□ -1.01
Msh6P54276 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 AC134577.3-201ENSMUST00000226490 3000 ntBASIC8.75□□□□□ -1.01
Msh6P54276 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
Msh6P54276 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Msh6P54276 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.74□□□□□ -1.01
Msh6P54276 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.74□□□□□ -1.01
Msh6P54276 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.74□□□□□ -1.01
Msh6P54276 Gm23450-201ENSMUST00000178285 91 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Gm27348-201ENSMUST00000184511 170 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Gm5260-201ENSMUST00000186157 949 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Gm37689-201ENSMUST00000193139 275 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Gm43689-201ENSMUST00000195951 427 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Gm24621-201ENSMUST00000082679 140 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Gm6990-201ENSMUST00000086830 348 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Msh6P54276 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Msh6P54276 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.74□□□□□ -1.01
Msh6P54276 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Msh6P54276 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.74□□□□□ -1.01
Msh6P54276 Gm11271-201ENSMUST00000116054 440 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm5125-201ENSMUST00000148614 624 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Msh6P54276 n-R5s209-201ENSMUST00000179494 119 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Gm27299-201ENSMUST00000184593 103 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm38237-201ENSMUST00000193366 376 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm43867-201ENSMUST00000203860 525 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.73□□□□□ -1.01
Msh6P54276 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC8.73□□□□□ -1.01
Msh6P54276 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.73□□□□□ -1.01
Msh6P54276 Gm5119-201ENSMUST00000215858 634 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms