Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC8.73□□□□□ -1.01
Rfx1P48377 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Rfx1P48377 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rfx1P48377 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm25313-201ENSMUST00000101817 116 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm23358-201ENSMUST00000103887 110 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm22271-201ENSMUST00000104035 128 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.72□□□□□ -1.01
Rfx1P48377 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm2003-201ENSMUST00000118537 636 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm14103-201ENSMUST00000119075 366 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm12313-201ENSMUST00000121347 421 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Mir1903-201ENSMUST00000122574 80 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm1989-201ENSMUST00000126244 636 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm25721-201ENSMUST00000157496 171 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm24363-201ENSMUST00000158440 311 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm23007-201ENSMUST00000158951 177 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm3123-201ENSMUST00000163480 480 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm11107-201ENSMUST00000165414 505 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Rfx1P48377 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm3611-201ENSMUST00000173687 877 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm23287-201ENSMUST00000179427 116 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm23143-201ENSMUST00000180137 116 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Rfx1P48377 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.72□□□□□ -1.01
Rfx1P48377 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm40319-201ENSMUST00000199785 481 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm43725-201ENSMUST00000200122 369 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm44285-201ENSMUST00000203557 940 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm44234-201ENSMUST00000204246 900 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rfx1P48377 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 AC118230.1-201ENSMUST00000220196 656 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm5668-201ENSMUST00000220897 436 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 AC144733.1-201ENSMUST00000222893 1289 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 AC131745.3-201ENSMUST00000223582 554 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 AC102815.1-201ENSMUST00000226662 1061 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 AC154738.1-201ENSMUST00000227054 368 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Rfx1P48377 Olfr888-201ENSMUST00000075228 945 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm4953-201ENSMUST00000077309 483 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Olfr890-201ENSMUST00000079804 945 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm24143-201ENSMUST00000082633 145 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Gm24871-201ENSMUST00000083099 116 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Rnu5g-201ENSMUST00000093721 116 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.72□□□□□ -1.01
Rfx1P48377 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm42736-201ENSMUST00000200723 1353 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm37470-201ENSMUST00000193378 2798 ntBASIC8.72□□□□□ -1.01
Rfx1P48377 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rfx1P48377 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC8.71□□□□□ -1.01
Rfx1P48377 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Rfx1P48377 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rfx1P48377 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.71□□□□□ -1.01
Rfx1P48377 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rfx1P48377 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Rfx1P48377 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Rfx1P48377 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Rfx1P48377 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rfx1P48377 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Rfx1P48377 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm8051-201ENSMUST00000120464 466 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms