Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HttP42859 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
HttP42859 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.97□□□□□ -1.29
HttP42859 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HttP42859 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HttP42859 Gm9517-201ENSMUST00000195021 874 ntBASIC6.97□□□□□ -1.29
HttP42859 Gm3544-201ENSMUST00000196129 305 ntBASIC6.97□□□□□ -1.29
HttP42859 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.97□□□□□ -1.29
HttP42859 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.97□□□□□ -1.29
HttP42859 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.97□□□□□ -1.29
HttP42859 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.97□□□□□ -1.29
HttP42859 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HttP42859 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HttP42859 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.97□□□□□ -1.29
HttP42859 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.97□□□□□ -1.29
HttP42859 Gm7670-201ENSMUST00000121272 641 ntBASIC6.97□□□□□ -1.29
HttP42859 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.97□□□□□ -1.29
HttP42859 Mir5125-201ENSMUST00000175240 79 ntBASIC6.97□□□□□ -1.29
HttP42859 Gm18969-201ENSMUST00000189423 730 ntBASIC6.97□□□□□ -1.29
HttP42859 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.97□□□□□ -1.29
HttP42859 Gm9315-201ENSMUST00000222696 908 ntBASIC6.97□□□□□ -1.29
HttP42859 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HttP42859 Gm44996-201ENSMUST00000208787 2980 ntBASIC6.97□□□□□ -1.29
HttP42859 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HttP42859 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC6.96□□□□□ -1.29
HttP42859 Gm15901-201ENSMUST00000117663 941 ntBASIC6.96□□□□□ -1.29
HttP42859 Gm6744-201ENSMUST00000119303 543 ntBASIC6.96□□□□□ -1.29
HttP42859 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.96□□□□□ -1.29
HttP42859 Gm16269-201ENSMUST00000160532 409 ntBASIC6.96□□□□□ -1.29
HttP42859 Gm37681-201ENSMUST00000193880 727 ntBASIC6.96□□□□□ -1.29
HttP42859 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.96□□□□□ -1.29
HttP42859 Gm42663-201ENSMUST00000199883 351 ntBASIC6.96□□□□□ -1.29
HttP42859 Gm19182-201ENSMUST00000207139 577 ntBASIC6.96□□□□□ -1.29
HttP42859 Gm4587-201ENSMUST00000209135 637 ntBASIC6.96□□□□□ -1.29
HttP42859 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.96□□□□□ -1.29
HttP42859 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HttP42859 Gm5457-201ENSMUST00000022260 333 ntBASIC6.96□□□□□ -1.29
HttP42859 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.96□□□□□ -1.29
HttP42859 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HttP42859 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
HttP42859 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HttP42859 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.96□□□□□ -1.29
HttP42859 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HttP42859 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.96□□□□□ -1.29
HttP42859 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.96□□□□□ -1.29
HttP42859 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HttP42859 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.96□□□□□ -1.29
HttP42859 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
HttP42859 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
HttP42859 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
HttP42859 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HttP42859 Gm13626-201ENSMUST00000119435 402 ntBASIC6.96□□□□□ -1.3
HttP42859 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.96□□□□□ -1.3
HttP42859 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.96□□□□□ -1.3
HttP42859 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Gm37199-201ENSMUST00000193881 4065 ntBASIC6.96□□□□□ -1.3
HttP42859 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 AC154377.1-201ENSMUST00000226752 4979 ntBASIC6.96□□□□□ -1.3
HttP42859 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.96□□□□□ -1.3
HttP42859 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Gm24888-201ENSMUST00000104387 130 ntBASIC6.96□□□□□ -1.3
HttP42859 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.96□□□□□ -1.3
HttP42859 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.96□□□□□ -1.3
HttP42859 Gm23050-201ENSMUST00000158775 165 ntBASIC6.96□□□□□ -1.3
HttP42859 Mir3080-201ENSMUST00000175010 79 ntBASIC6.96□□□□□ -1.3
HttP42859 Gm26057-201ENSMUST00000178099 165 ntBASIC6.96□□□□□ -1.3
HttP42859 Mir6343-201ENSMUST00000183584 84 ntBASIC6.96□□□□□ -1.3
HttP42859 Gm9332-201ENSMUST00000198431 730 ntBASIC6.96□□□□□ -1.3
HttP42859 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HttP42859 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
HttP42859 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.96□□□□□ -1.3
HttP42859 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HttP42859 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
HttP42859 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HttP42859 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HttP42859 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms