Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox6P40645 Mir1981-201ENSMUST00000157934 82 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox6P40645 Gm3208-201ENSMUST00000168281 427 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Mir378d-201ENSMUST00000184232 110 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Gm6472-202ENSMUST00000187973 582 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.43□□□□□ -1.38
Sox6P40645 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox6P40645 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox6P40645 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Gm44971-201ENSMUST00000206192 337 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Sox6P40645 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Gm7419-201ENSMUST00000209962 925 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Gm18860-201ENSMUST00000212029 764 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.43□□□□□ -1.38
Sox6P40645 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox6P40645 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox6P40645 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox6P40645 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Sox6P40645 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox6P40645 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox6P40645 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox6P40645 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox6P40645 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.43□□□□□ -1.38
Sox6P40645 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox6P40645 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox6P40645 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Sox6P40645 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Sox6P40645 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.42□□□□□ -1.38
Sox6P40645 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Gm8421-201ENSMUST00000119439 305 ntBASIC6.42□□□□□ -1.38
Sox6P40645 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm6067-201ENSMUST00000121648 491 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox6P40645 Gm26323-201ENSMUST00000157743 175 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm25180-201ENSMUST00000157746 115 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm23027-201ENSMUST00000158771 158 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox6P40645 Gm7651-201ENSMUST00000173398 901 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm26959-201ENSMUST00000182376 978 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Mir6357-201ENSMUST00000184246 104 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox6P40645 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.42□□□□□ -1.38
Sox6P40645 Gm21054-201ENSMUST00000203981 380 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm43905-201ENSMUST00000204516 204 ntBASIC6.42□□□□□ -1.38
Sox6P40645 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox6P40645 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox6P40645 Gm34424-201ENSMUST00000213400 782 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm32899-201ENSMUST00000219694 207 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox6P40645 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.42□□□□□ -1.38
Sox6P40645 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.42□□□□□ -1.38
Sox6P40645 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.42□□□□□ -1.38
Sox6P40645 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.42□□□□□ -1.38
Sox6P40645 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gm2840-201ENSMUST00000048361 411 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Sox6P40645 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Gm24924-201ENSMUST00000084007 164 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Sox6P40645 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Sox6P40645 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox6P40645 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox6P40645 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox6P40645 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.42□□□□□ -1.38
Sox6P40645 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox6P40645 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox6P40645 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox6P40645 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox6P40645 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox6P40645 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms