Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm11796-201ENSMUST00000120208 972 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm15842-201ENSMUST00000120513 618 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm22533-201ENSMUST00000158821 274 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm42883-201ENSMUST00000202594 222 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm31711-201ENSMUST00000220687 196 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm5446-201ENSMUST00000091762 784 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Cmah-208ENSMUST00000224819 9482 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm24519-201ENSMUST00000104507 132 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm14466-201ENSMUST00000119028 451 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm24157-201ENSMUST00000175265 111 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm24756-201ENSMUST00000177002 96 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm27185-201ENSMUST00000184296 247 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm28413-201ENSMUST00000189369 291 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm38840-201ENSMUST00000204716 843 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.43□□□□□ -1.22
Chmp6P0C0A3 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm13423-201ENSMUST00000117205 888 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm14729-201ENSMUST00000118373 689 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm6142-201ENSMUST00000120290 325 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm15316-201ENSMUST00000121082 421 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm16284-201ENSMUST00000140995 400 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms