Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm11855-201ENSMUST00000121562 1869 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Mbnl2-203ENSMUST00000226800 3328 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm26146-201ENSMUST00000104478 185 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm13642-201ENSMUST00000121697 381 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm6061-201ENSMUST00000175860 492 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Mir6337-201ENSMUST00000184194 105 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm43558-201ENSMUST00000200155 210 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC5.51□□□□□ -1.53
Hmgb3O54879 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm18292-201ENSMUST00000216673 919 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm18960-201ENSMUST00000222962 713 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 AC126939.4-201ENSMUST00000225360 743 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 CT571271.1-201ENSMUST00000227071 670 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm24405-201ENSMUST00000083033 167 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm24613-201ENSMUST00000083266 130 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hmgb3O54879 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.51□□□□□ -1.53
Hmgb3O54879 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb3O54879 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb3O54879 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm23701-201ENSMUST00000103893 110 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm11880-201ENSMUST00000117612 399 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm6067-201ENSMUST00000121648 491 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm25505-201ENSMUST00000157220 246 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm23117-201ENSMUST00000158482 108 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm22949-201ENSMUST00000158562 105 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm22670-201ENSMUST00000158724 143 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm18033-201ENSMUST00000186678 550 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm28239-201ENSMUST00000190225 447 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm37669-201ENSMUST00000192184 820 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm37977-201ENSMUST00000193096 721 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Ighv5-1-201ENSMUST00000193324 353 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm5851-201ENSMUST00000194132 1204 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm42977-201ENSMUST00000197497 144 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm2505-201ENSMUST00000200413 825 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms