Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm37897-201ENSMUST00000192613 3561 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Gm8276-201ENSMUST00000192231 1812 ntBASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc180J3QNE4 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm25675-201ENSMUST00000174979 118 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Mir199b-201ENSMUST00000175066 110 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm44422-201ENSMUST00000204142 1025 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm44982-201ENSMUST00000208795 471 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm18851-201ENSMUST00000210087 1058 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 AC140930.1-201ENSMUST00000221889 389 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 AV026068-216ENSMUST00000223874 328 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 AV026068-218ENSMUST00000223980 575 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm44121-201ENSMUST00000205169 2006 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm10416-201ENSMUST00000197379 645 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm17950-201ENSMUST00000214617 646 ntBASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc180J3QNE4 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm43029-201ENSMUST00000201829 1535 ntBASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm37233-201ENSMUST00000192173 6263 ntBASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm43383-201ENSMUST00000195981 469 ntBASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Gm4083-201ENSMUST00000207158 451 ntBASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc180J3QNE4 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm26079-201ENSMUST00000104066 133 ntBASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm37380-201ENSMUST00000193752 397 ntBASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm44091-201ENSMUST00000205212 649 ntBASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm18600-201ENSMUST00000207205 505 ntBASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm7986-201ENSMUST00000221336 551 ntBASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Gm35619-201ENSMUST00000222548 600 ntBASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc180J3QNE4 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc180J3QNE4 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc180J3QNE4 Gm7961-201ENSMUST00000201338 1436 ntBASIC12.46□□□□□ -0.42
Ccdc180J3QNE4 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc180J3QNE4 Gm14762-201ENSMUST00000105109 1771 ntBASIC12.46□□□□□ -0.42
Ccdc180J3QNE4 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc180J3QNE4 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc180J3QNE4 Gm18879-201ENSMUST00000221187 1537 ntBASIC12.45□□□□□ -0.42
Ccdc180J3QNE4 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc180J3QNE4 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC12.45□□□□□ -0.42
Ccdc180J3QNE4 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc180J3QNE4 Gm9064-201ENSMUST00000163579 566 ntBASIC12.45□□□□□ -0.42
Ccdc180J3QNE4 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc180J3QNE4 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms