Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm11799-201ENSMUST00000116110 460 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm22953-201ENSMUST00000116724 101 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm23430-201ENSMUST00000122490 314 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm23958-201ENSMUST00000157207 105 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm18808-201ENSMUST00000173316 462 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm21392-201ENSMUST00000182950 972 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm35323-201ENSMUST00000191836 499 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm37620-201ENSMUST00000192910 501 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm9240-201ENSMUST00000206527 742 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm17950-201ENSMUST00000214617 646 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Olfr809-203ENSMUST00000218237 1100 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm7252-201ENSMUST00000223284 456 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 AC124489.3-201ENSMUST00000224037 278 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 AC114008.1-201ENSMUST00000226193 937 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Pramel-201ENSMUST00000118979 1383 ntBASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC9.34□□□□□ -0.91
Tmf1B9EKI3 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Mir674-201ENSMUST00000102421 100 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Snord88a-201ENSMUST00000116723 90 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm11501-201ENSMUST00000118039 581 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm12583-201ENSMUST00000120677 853 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm12369-201ENSMUST00000121343 942 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm13462-201ENSMUST00000121472 961 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm24383-201ENSMUST00000122691 333 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm22552-201ENSMUST00000157796 337 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm25717-201ENSMUST00000158631 353 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm22530-201ENSMUST00000158820 118 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm9027-201ENSMUST00000165914 661 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm7289-201ENSMUST00000168993 734 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm23810-201ENSMUST00000175150 74 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm10410-201ENSMUST00000180138 384 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm26898-201ENSMUST00000181678 384 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm36965-201ENSMUST00000193797 394 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 AC155941.3-201ENSMUST00000218476 308 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 AC151730.1-201ENSMUST00000226106 448 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 AC154640.1-202ENSMUST00000227828 496 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm22684-201ENSMUST00000082849 132 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Mir106b-201ENSMUST00000083580 82 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tmf1B9EKI3 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Tmf1B9EKI3 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms