Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm43429-201ENSMUST00000197889 2251 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm42572-201ENSMUST00000202292 3378 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm8250-201ENSMUST00000117398 774 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm15216-201ENSMUST00000118058 277 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm11879-201ENSMUST00000121885 702 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm12438-201ENSMUST00000122034 336 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm22024-201ENSMUST00000122733 287 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 CT009711.1-201ENSMUST00000223992 3040 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm11984-201ENSMUST00000118142 766 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm15568-201ENSMUST00000118589 1213 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm25219-201ENSMUST00000157545 330 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Mir6403-201ENSMUST00000185007 129 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm44669-201ENSMUST00000207774 1969 ntBASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a4A2AX52 Gm37161-201ENSMUST00000191994 2697 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm12135-201ENSMUST00000119170 466 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm11533-201ENSMUST00000120287 477 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm15194-201ENSMUST00000120453 434 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms