Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm25725-201ENSMUST00000104528 130 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm12105-201ENSMUST00000120846 779 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm2735-201ENSMUST00000136133 277 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm27373-201ENSMUST00000184017 184 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm18752-201ENSMUST00000192876 608 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm42932-201ENSMUST00000197280 744 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm45525-201ENSMUST00000210800 389 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm9315-201ENSMUST00000222696 908 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Zfp850-201ENSMUST00000099111 941 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.3□□□□□ -1.4
H2afb3S4R1G7 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm14480-201ENSMUST00000118521 433 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm15158-201ENSMUST00000120577 570 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm12477-201ENSMUST00000121221 571 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm22311-201ENSMUST00000158006 110 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm22206-201ENSMUST00000158612 116 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms