Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm14251-201ENSMUST00000122133 279 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm11962-201ENSMUST00000145746 255 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm22311-201ENSMUST00000158006 110 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm16026-205ENSMUST00000162923 641 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm4613-201ENSMUST00000165488 276 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm21182-201ENSMUST00000178899 794 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm7426-201ENSMUST00000179046 404 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm17786-201ENSMUST00000182000 427 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm44147-201ENSMUST00000204658 94 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm14158-201ENSMUST00000118409 308 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm14727-201ENSMUST00000118526 525 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm14721-201ENSMUST00000121381 525 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm26323-201ENSMUST00000157743 175 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Mir199b-201ENSMUST00000175066 110 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Mir378d-201ENSMUST00000184232 110 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm27782-201ENSMUST00000185059 199 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm36935-201ENSMUST00000192526 292 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm37328-201ENSMUST00000193191 640 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm22711-202ENSMUST00000197029 135 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm43926-201ENSMUST00000203978 430 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm45725-201ENSMUST00000212962 337 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm46311-201ENSMUST00000217971 203 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm2398-201ENSMUST00000218347 883 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 AC132446.1-201ENSMUST00000222655 226 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 AV026068-218ENSMUST00000223980 575 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 A1cf-203ENSMUST00000224400 1204 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm15500-201ENSMUST00000071523 894 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm24411-201ENSMUST00000083428 131 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms