Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm26429-201ENSMUST00000104829 110 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm16418-201ENSMUST00000118577 171 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm14466-201ENSMUST00000119028 451 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm14485-201ENSMUST00000119489 493 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 n-R5s30-201ENSMUST00000122624 122 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm22254-201ENSMUST00000179186 110 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm27588-201ENSMUST00000185096 263 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm38097-201ENSMUST00000192936 439 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm18445-201ENSMUST00000195502 774 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 AC139376.1-201ENSMUST00000220056 1250 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 AC159205.1-201ENSMUST00000225513 1099 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm6284-201ENSMUST00000209609 4287 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm43528-201ENSMUST00000199492 1674 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm43023-201ENSMUST00000197583 2106 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm37373-201ENSMUST00000194005 2812 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm38359-201ENSMUST00000191884 2225 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm14007-201ENSMUST00000118288 210 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm6427-201ENSMUST00000118721 979 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm4910-201ENSMUST00000119605 366 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm13163-201ENSMUST00000119875 336 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm6373-201ENSMUST00000121026 360 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm11385-201ENSMUST00000121513 570 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm15275-201ENSMUST00000154752 347 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm24065-201ENSMUST00000157487 264 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm7763-201ENSMUST00000182220 1006 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm7654-201ENSMUST00000186738 683 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm29143-201ENSMUST00000189462 201 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm38221-201ENSMUST00000195146 365 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm17967-201ENSMUST00000195319 647 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm37908-201ENSMUST00000195828 470 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm18877-201ENSMUST00000207706 539 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 AC154296.3-201ENSMUST00000214427 712 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.24□□□□□ -0.93
Ube3bQ9ES34 Gm19007-201ENSMUST00000217746 874 ntBASIC9.24□□□□□ -0.93
Ube3bQ9ES34 AC163296.1-202ENSMUST00000218395 661 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms