Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Snhg7-201ENSMUST00000181621 139 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm28193-201ENSMUST00000189863 615 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm20871-201ENSMUST00000191322 931 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm37822-201ENSMUST00000192618 1109 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm34015-201ENSMUST00000194908 451 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm17977-201ENSMUST00000198743 574 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Ighv8-16-201ENSMUST00000199258 294 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm43004-201ENSMUST00000201872 703 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm44285-201ENSMUST00000203557 940 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm18907-201ENSMUST00000209719 932 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm8489-201ENSMUST00000209876 1152 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 AC153957.1-201ENSMUST00000215235 229 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm46103-201ENSMUST00000217614 341 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 AC132384.1-201ENSMUST00000219908 1195 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm46313-201ENSMUST00000220463 547 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm32300-201ENSMUST00000221735 515 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 AC123534.1-201ENSMUST00000224060 656 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 AC167013.6-201ENSMUST00000226587 1067 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 AC163295.1-201ENSMUST00000227840 314 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm26132-201ENSMUST00000083166 148 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Snora57-201ENSMUST00000093658 148 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim13Q9CYB0 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Trim13Q9CYB0 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Trim13Q9CYB0 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
Trim13Q9CYB0 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Trim13Q9CYB0 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Trim13Q9CYB0 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm43322-201ENSMUST00000196232 1612 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Mir704-201ENSMUST00000102106 77 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm24938-201ENSMUST00000102225 110 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm25607-201ENSMUST00000104020 127 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm13607-201ENSMUST00000117875 539 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm12310-201ENSMUST00000118013 492 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm15484-201ENSMUST00000118871 828 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm13915-201ENSMUST00000119314 931 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm11410-201ENSMUST00000120053 1143 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm14528-201ENSMUST00000120615 231 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm14328-201ENSMUST00000122178 408 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm29073-201ENSMUST00000185563 664 ntBASIC7.02□□□□□ -1.29
Trim13Q9CYB0 Gm29064-201ENSMUST00000187014 813 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms