Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm5319-201ENSMUST00000118965 873 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm11198-201ENSMUST00000119771 974 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm30708-201ENSMUST00000202183 312 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm31579-201ENSMUST00000203306 966 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm44258-201ENSMUST00000204925 301 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Use1Q9CQ56 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Use1Q9CQ56 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.45□□□□□ -1.38
Use1Q9CQ56 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm14279-201ENSMUST00000117142 332 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm10243-201ENSMUST00000117571 333 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm15616-201ENSMUST00000118662 375 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm8916-201ENSMUST00000119732 949 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm11954-201ENSMUST00000121403 349 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm17212-201ENSMUST00000166666 259 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm28958-201ENSMUST00000185864 703 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm7419-201ENSMUST00000209962 925 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.44□□□□□ -1.38
Use1Q9CQ56 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Use1Q9CQ56 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms