Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm16285-201ENSMUST00000162999 347 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm24576-201ENSMUST00000175508 248 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm5445-201ENSMUST00000180224 480 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm37024-201ENSMUST00000192224 868 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm8826-201ENSMUST00000193161 948 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm7542-201ENSMUST00000201140 777 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm6681-201ENSMUST00000205215 607 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 CT030194.2-201ENSMUST00000225752 379 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 AC154283.1-201ENSMUST00000228417 389 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Olfr1153-201ENSMUST00000052300 957 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm44242-201ENSMUST00000204212 2721 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.04□□□□□ -1.28
Trim8Q99PJ2 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm8836-201ENSMUST00000198196 1348 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm24142-201ENSMUST00000101960 107 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm16056-201ENSMUST00000119293 135 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm11945-201ENSMUST00000120551 476 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm15719-201ENSMUST00000120619 635 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm23441-201ENSMUST00000157268 127 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm25437-201ENSMUST00000158282 132 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm7281-201ENSMUST00000160010 543 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm18033-201ENSMUST00000186678 550 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm8641-201ENSMUST00000186995 826 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm37845-201ENSMUST00000194977 355 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Mir1897-202ENSMUST00000198006 79 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm9497-201ENSMUST00000199908 538 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm18765-201ENSMUST00000203166 660 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms