Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm13988-201ENSMUST00000119363 288 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm26182-201ENSMUST00000157688 116 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm24130-201ENSMUST00000158536 151 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm7502-201ENSMUST00000169235 733 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm20430-201ENSMUST00000172474 207 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm26570-201ENSMUST00000180672 342 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm27019-201ENSMUST00000183056 404 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Diaph3-204ENSMUST00000226254 682 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.71□□□□□ -1.18
Ccdc38Q8CDN8 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm23834-201ENSMUST00000104436 129 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm13798-201ENSMUST00000118285 139 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm15007-201ENSMUST00000119982 710 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm24286-201ENSMUST00000157632 128 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm22552-201ENSMUST00000157796 337 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm23891-201ENSMUST00000158114 138 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm17217-201ENSMUST00000166613 469 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm19739-201ENSMUST00000195941 153 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm44722-201ENSMUST00000206473 436 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 AC122305.2-201ENSMUST00000215148 834 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Cmah-208ENSMUST00000224819 9482 ntBASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc38Q8CDN8 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc38Q8CDN8 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc38Q8CDN8 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc38Q8CDN8 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc38Q8CDN8 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.69□□□□□ -1.18
Ccdc38Q8CDN8 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc38Q8CDN8 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc38Q8CDN8 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 148 ms