Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Lrif1Q8CDD9 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm11880-201ENSMUST00000117612 399 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm6067-201ENSMUST00000121648 491 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm15644-201ENSMUST00000121764 387 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm10913-201ENSMUST00000133732 463 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm29197-201ENSMUST00000185922 702 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm42580-201ENSMUST00000197223 753 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm44931-201ENSMUST00000206056 545 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lrif1Q8CDD9 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm22671-201ENSMUST00000104420 134 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm14279-201ENSMUST00000117142 332 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm10243-201ENSMUST00000117571 333 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm13940-201ENSMUST00000121023 301 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm22552-201ENSMUST00000157796 337 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm26179-201ENSMUST00000177723 132 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm43160-201ENSMUST00000196453 421 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm46311-201ENSMUST00000217971 203 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm24411-201ENSMUST00000083428 131 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Gm10247-201ENSMUST00000090395 333 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms