Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm9672-201ENSMUST00000166437 425 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm6726-201ENSMUST00000172786 681 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm22702-201ENSMUST00000175372 69 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Mir7011-201ENSMUST00000183768 73 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm43689-201ENSMUST00000195951 427 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm19092-201ENSMUST00000209036 969 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm25587-201ENSMUST00000082498 166 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Mir296-201ENSMUST00000083587 79 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.01□□□□□ -1.29
Trub1Q8C0D0 Gm45084-201ENSMUST00000207096 1957 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm38070-201ENSMUST00000191850 6480 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm21392-201ENSMUST00000182950 972 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28739-201ENSMUST00000185415 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28219-201ENSMUST00000185452 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28542-201ENSMUST00000185545 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28303-201ENSMUST00000185642 747 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29244-201ENSMUST00000185825 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29437-201ENSMUST00000185865 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29412-201ENSMUST00000185869 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28910-201ENSMUST00000185921 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28812-201ENSMUST00000185963 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29468-201ENSMUST00000185978 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28335-201ENSMUST00000186204 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28854-201ENSMUST00000186218 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28636-201ENSMUST00000186353 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28452-201ENSMUST00000186623 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29298-201ENSMUST00000186704 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28185-201ENSMUST00000186815 694 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28227-201ENSMUST00000186862 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28796-201ENSMUST00000186905 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29659-201ENSMUST00000187063 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28473-201ENSMUST00000187325 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28558-201ENSMUST00000187373 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28682-201ENSMUST00000187430 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28738-201ENSMUST00000187480 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28949-201ENSMUST00000187805 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28773-201ENSMUST00000187925 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29319-201ENSMUST00000188060 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29422-201ENSMUST00000188062 694 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28734-201ENSMUST00000188104 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28787-201ENSMUST00000188357 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29312-201ENSMUST00000188724 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29451-201ENSMUST00000188862 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29637-201ENSMUST00000188877 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29033-201ENSMUST00000189114 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29614-201ENSMUST00000189263 694 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28751-201ENSMUST00000189287 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29559-201ENSMUST00000189412 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28272-201ENSMUST00000189512 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28483-201ENSMUST00000189519 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28123-201ENSMUST00000189725 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28368-201ENSMUST00000189804 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29119-201ENSMUST00000189973 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28716-201ENSMUST00000190217 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29239-201ENSMUST00000190304 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28837-201ENSMUST00000190397 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28968-201ENSMUST00000190413 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28531-201ENSMUST00000190529 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm28165-201ENSMUST00000190669 694 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm29181-201ENSMUST00000191288 696 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms