Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Mir760-201ENSMUST00000103257 119 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12573-201ENSMUST00000118158 286 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm11370-201ENSMUST00000120583 260 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm15349-201ENSMUST00000121154 204 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm3344-201ENSMUST00000169610 603 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm22990-201ENSMUST00000175427 89 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm27804-201ENSMUST00000185135 119 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm37439-201ENSMUST00000193150 856 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Ighv10-4-201ENSMUST00000193702 299 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm5711-201ENSMUST00000197896 421 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm43212-201ENSMUST00000198208 394 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm7452-201ENSMUST00000200764 788 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm9110-201ENSMUST00000219035 617 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Zmym2-202ENSMUST00000223669 1281 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sh3rf2Q8BZT2 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12653-201ENSMUST00000117778 561 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12752-201ENSMUST00000121657 811 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm23756-201ENSMUST00000157582 114 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm24176-201ENSMUST00000158928 121 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm29470-201ENSMUST00000188007 696 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm42708-201ENSMUST00000196332 905 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm8168-201ENSMUST00000209631 948 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm46231-201ENSMUST00000220152 314 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 144.5 ms