Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mir196a-1-201ENSMUST00000083612 102 ntBASIC9.64□□□□□ -0.87
Usp47Q8BY87 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.64□□□□□ -0.87
Usp47Q8BY87 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC9.64□□□□□ -0.87
Usp47Q8BY87 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Gm43181-201ENSMUST00000197001 2072 ntBASIC9.64□□□□□ -0.87
Usp47Q8BY87 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp47Q8BY87 CT030185.1-201ENSMUST00000222940 2289 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm25435-201ENSMUST00000158277 267 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm27152-201ENSMUST00000183828 99 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm27507-201ENSMUST00000184199 93 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Ighv8-3-201ENSMUST00000194985 295 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm42443-201ENSMUST00000198084 1155 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm19175-201ENSMUST00000199895 916 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 AC125117.2-201ENSMUST00000228344 1140 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Zfp865-202ENSMUST00000076791 1129 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm9839-201ENSMUST00000195252 1437 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm37570-201ENSMUST00000195411 3106 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm15681-201ENSMUST00000137501 2704 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm25785-201ENSMUST00000104129 125 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm11796-201ENSMUST00000120208 972 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm18808-201ENSMUST00000173316 462 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm20530-201ENSMUST00000174261 254 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm7804-202ENSMUST00000194187 854 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 AC133203.1-201ENSMUST00000228241 301 ntBASIC9.63□□□□□ -0.87
Usp47Q8BY87 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Usp47Q8BY87 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gm10773-201ENSMUST00000218071 3935 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gm37420-201ENSMUST00000195332 2912 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 AC135083.2-201ENSMUST00000228599 1456 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gm13416-201ENSMUST00000117264 1612 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Usp47Q8BY87 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 CT009757.4-201ENSMUST00000221520 2541 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gm14733-201ENSMUST00000117680 133 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gm3810-201ENSMUST00000122413 476 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gm3344-201ENSMUST00000169610 603 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms