Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm25435-201ENSMUST00000158277 267 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm23757-201ENSMUST00000158353 100 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm29663-201ENSMUST00000186962 853 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm10925-201ENSMUST00000189941 678 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 AC117240.1-201ENSMUST00000199436 61 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm45899-201ENSMUST00000212196 1276 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm9315-201ENSMUST00000222696 908 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm37663-201ENSMUST00000191887 2299 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm24473-201ENSMUST00000104483 131 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm13983-201ENSMUST00000118018 865 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm12242-201ENSMUST00000118824 738 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm12369-201ENSMUST00000121343 942 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm25660-201ENSMUST00000158470 104 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm5456-201ENSMUST00000170706 844 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm17045-201ENSMUST00000178600 844 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm27295-201ENSMUST00000184264 153 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm37684-201ENSMUST00000192779 355 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm43689-201ENSMUST00000195951 427 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 AC153529.1-201ENSMUST00000217818 370 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm7413-201ENSMUST00000219498 462 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm9231-201ENSMUST00000220817 1009 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 AC160962.2-201ENSMUST00000224761 632 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp40Q8BWR4 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm24541-201ENSMUST00000103871 96 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm26353-201ENSMUST00000158224 255 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm25025-201ENSMUST00000175018 111 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm37189-201ENSMUST00000192131 298 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm36935-201ENSMUST00000192526 292 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm38840-201ENSMUST00000204716 843 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm32983-201ENSMUST00000208500 505 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm45693-201ENSMUST00000211391 1157 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm7439-201ENSMUST00000214053 835 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm2139-201ENSMUST00000222569 1075 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 CT025538.2-201ENSMUST00000226083 772 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Gm25587-201ENSMUST00000082498 166 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 Mir196a-1-201ENSMUST00000083612 102 ntBASIC9.47□□□□□ -0.89
Usp40Q8BWR4 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms