Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Gm12643-201ENSMUST00000116078 374 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 Gm24179-201ENSMUST00000158925 127 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 Gm22548-201ENSMUST00000174899 78 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 Gm7952-201ENSMUST00000180540 984 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 Mir7211-201ENSMUST00000184071 63 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 Gm18805-201ENSMUST00000206872 655 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 AC112680.2-201ENSMUST00000213119 595 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 Gm3266-201ENSMUST00000217832 591 ntBASIC9.65□□□□□ -0.86
Usp54Q8BL06 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp54Q8BL06 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Usp54Q8BL06 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp54Q8BL06 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp54Q8BL06 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp54Q8BL06 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp54Q8BL06 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 AC022775.1-201ENSMUST00000228163 2698 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm23739-201ENSMUST00000102295 108 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm12262-201ENSMUST00000119915 305 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm9428-201ENSMUST00000127214 769 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm3076-201ENSMUST00000161613 451 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Mir5110-201ENSMUST00000175537 87 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm27507-201ENSMUST00000184199 93 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm18839-201ENSMUST00000204292 670 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 AC170086.2-201ENSMUST00000224733 803 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 AC166574.7-201ENSMUST00000228502 704 ntBASIC9.64□□□□□ -0.87
Usp54Q8BL06 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp54Q8BL06 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm14805-201ENSMUST00000120172 340 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm23343-201ENSMUST00000158964 143 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm27460-201ENSMUST00000184213 100 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm42898-201ENSMUST00000200370 3073 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm18103-201ENSMUST00000216621 779 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 AC158521.1-202ENSMUST00000224352 645 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm8526-201ENSMUST00000079153 475 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm26289-201ENSMUST00000104169 131 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm24888-201ENSMUST00000104387 130 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm15967-201ENSMUST00000120027 1116 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm14695-201ENSMUST00000121721 282 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm37604-201ENSMUST00000191749 1272 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm37493-201ENSMUST00000193167 433 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp54Q8BL06 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 CT009515.3-201ENSMUST00000226509 671 ntBASIC9.63□□□□□ -0.87
Usp54Q8BL06 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp54Q8BL06 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms