Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm8644-201ENSMUST00000118619 596 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm12740-201ENSMUST00000118794 308 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm12601-201ENSMUST00000118994 846 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm8421-201ENSMUST00000119439 305 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm12321-201ENSMUST00000121485 804 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm9697-201ENSMUST00000147052 997 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm23617-201ENSMUST00000175410 95 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Mir378d-201ENSMUST00000184232 110 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm7419-201ENSMUST00000209962 925 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm6885-201ENSMUST00000217261 372 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm19011-201ENSMUST00000221777 808 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm12459-201ENSMUST00000120659 356 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm5575-201ENSMUST00000190879 398 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm9723-201ENSMUST00000192100 457 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm6197-201ENSMUST00000192273 454 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm42580-201ENSMUST00000197223 753 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm24826-202ENSMUST00000197298 216 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm9315-201ENSMUST00000222696 908 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc40Q8BI79 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms