Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm26898-201ENSMUST00000181678 384 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm27853-201ENSMUST00000184176 250 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm27348-201ENSMUST00000184511 170 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm5055-201ENSMUST00000215697 581 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm26442-201ENSMUST00000082588 153 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm24709-201ENSMUST00000104123 132 ntBASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm22548-201ENSMUST00000174899 78 ntBASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm17048-201ENSMUST00000179266 847 ntBASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm28527-201ENSMUST00000185210 297 ntBASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm43354-201ENSMUST00000196862 346 ntBASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup98Q6PFD9 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Snora35-201ENSMUST00000104579 128 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Gm22953-201ENSMUST00000116724 101 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Gm24695-201ENSMUST00000083877 83 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup98Q6PFD9 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Gm21542-201ENSMUST00000182307 993 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Gm8869-201ENSMUST00000195222 947 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.96□□□□□ -1.13
Nup98Q6PFD9 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms