Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm37735-201ENSMUST00000193995 1406 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm23674-201ENSMUST00000157473 131 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm18805-201ENSMUST00000206872 655 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm18467-201ENSMUST00000208805 434 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm9110-201ENSMUST00000219035 617 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 AC158388.2-201ENSMUST00000223665 1314 ntBASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Shank3Q4ACU6 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm13641-201ENSMUST00000117993 473 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm23891-201ENSMUST00000158114 138 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm16112-201ENSMUST00000159075 382 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm37784-201ENSMUST00000193233 189 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm17824-201ENSMUST00000197690 805 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm31166-201ENSMUST00000209326 288 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 AC154718.1-201ENSMUST00000226676 250 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm8692-201ENSMUST00000118102 438 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm15967-201ENSMUST00000120027 1116 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm23343-201ENSMUST00000158964 143 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm20778-201ENSMUST00000178524 627 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Mir27a-201ENSMUST00000083510 87 ntBASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Shank3Q4ACU6 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Shank3Q4ACU6 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Shank3Q4ACU6 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Shank3Q4ACU6 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Shank3Q4ACU6 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms