Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trafd1Q3UDK1 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Mir708-201ENSMUST00000102189 109 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm26528-201ENSMUST00000181965 283 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Mir7084-201ENSMUST00000183876 70 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm28958-201ENSMUST00000185864 703 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm43243-201ENSMUST00000199964 278 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm42883-201ENSMUST00000202594 222 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm9604-201ENSMUST00000211175 433 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trafd1Q3UDK1 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm11689-201ENSMUST00000120766 302 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm7599-201ENSMUST00000121453 796 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm24286-201ENSMUST00000157632 128 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm23762-201ENSMUST00000158348 106 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm5283-201ENSMUST00000177874 334 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm23139-201ENSMUST00000179454 132 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm9167-201ENSMUST00000182469 962 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm8539-201ENSMUST00000199822 501 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm36448-201ENSMUST00000199916 438 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm44258-201ENSMUST00000204925 301 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm45725-201ENSMUST00000212962 337 ntBASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Trafd1Q3UDK1 Gm24405-201ENSMUST00000083033 167 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms