Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm5316-202ENSMUST00000185734 3096 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm22781-201ENSMUST00000104083 137 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm11991-201ENSMUST00000119652 1074 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm13680-201ENSMUST00000119790 793 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm13828-201ENSMUST00000122278 363 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm24680-201ENSMUST00000158759 126 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm8183-201ENSMUST00000183134 980 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm29369-201ENSMUST00000190674 615 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm412-201ENSMUST00000193360 948 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm18952-201ENSMUST00000194471 846 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm42164-201ENSMUST00000198881 379 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.43□□□□□ -1.38
Col8a1Q00780 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm45912-201ENSMUST00000210646 543 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm45506-201ENSMUST00000211620 280 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 AC153968.1-201ENSMUST00000215584 334 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC6.43□□□□□ -1.38
Col8a1Q00780 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col8a1Q00780 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm45534-201ENSMUST00000211449 2339 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col8a1Q00780 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm45737-201ENSMUST00000208344 1612 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 AC166159.1-201ENSMUST00000227154 1380 ntBASIC6.43□□□□□ -1.38
Col8a1Q00780 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col8a1Q00780 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm37022-201ENSMUST00000192517 2254 ntBASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col8a1Q00780 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col8a1Q00780 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col8a1Q00780 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms