Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm4994-201ENSMUST00000118379 2187 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm37924-201ENSMUST00000195470 3647 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm7670-201ENSMUST00000121272 641 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm5353-201ENSMUST00000139800 793 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm17217-201ENSMUST00000166613 469 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm43148-201ENSMUST00000198237 520 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm18422-201ENSMUST00000203663 1032 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm44952-201ENSMUST00000204443 433 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 LOC665443-201ENSMUST00000212284 796 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PrkdcP97313 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PrkdcP97313 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm14380-201ENSMUST00000122298 431 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm26489-201ENSMUST00000157880 264 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PrkdcP97313 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm19182-201ENSMUST00000207139 577 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm18996-201ENSMUST00000214851 755 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.52□□□□□ -1.69
PrkdcP97313 AC154861.1-201ENSMUST00000223767 800 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm5512-202ENSMUST00000220222 1522 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm42837-201ENSMUST00000197071 2829 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PrkdcP97313 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm13493-201ENSMUST00000120318 493 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm27887-201ENSMUST00000184367 102 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm18036-201ENSMUST00000195256 272 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm3544-201ENSMUST00000196129 305 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
PrkdcP97313 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 CT025642.2-201ENSMUST00000225009 1649 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC4.52□□□□□ -1.69
PrkdcP97313 Gm38077-201ENSMUST00000193657 3245 ntBASIC4.52□□□□□ -1.69
PrkdcP97313 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PrkdcP97313 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm43681-201ENSMUST00000201581 1903 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm26079-201ENSMUST00000104066 133 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Gm14220-201ENSMUST00000118114 449 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm1972-201ENSMUST00000181606 964 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Gm9480-201ENSMUST00000198038 616 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm2762-207ENSMUST00000202739 2665 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms