Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 AC154245.1-201ENSMUST00000224615 601 ntBASIC7.8□□□□□ -1.16
Trim43cP86449 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.8□□□□□ -1.16
Trim43cP86449 AC133517.2-201ENSMUST00000226820 690 ntBASIC7.8□□□□□ -1.16
Trim43cP86449 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43cP86449 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim43cP86449 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim43cP86449 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43cP86449 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43cP86449 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43cP86449 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Trim43cP86449 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim43cP86449 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43cP86449 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43cP86449 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43cP86449 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim43cP86449 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.8□□□□□ -1.16
Trim43cP86449 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.8□□□□□ -1.16
Trim43cP86449 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim43cP86449 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim43cP86449 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim43cP86449 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm12740-201ENSMUST00000118794 308 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Gm16284-201ENSMUST00000140995 400 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Gm26323-201ENSMUST00000157743 175 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim43cP86449 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim43cP86449 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm7426-201ENSMUST00000179046 404 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm8282-201ENSMUST00000187559 483 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Gm6472-202ENSMUST00000187973 582 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm34424-201ENSMUST00000213400 782 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Gm7588-201ENSMUST00000216866 571 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Olfr844-201ENSMUST00000054106 930 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim43cP86449 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Trim43cP86449 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.79□□□□□ -1.16
Trim43cP86449 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43cP86449 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim43cP86449 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim43cP86449 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trim43cP86449 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim43cP86449 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim43cP86449 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm25414-201ENSMUST00000101814 107 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim43cP86449 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm14893-201ENSMUST00000117904 282 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm13463-201ENSMUST00000119020 233 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm10913-201ENSMUST00000133732 463 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm26595-201ENSMUST00000181585 484 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm3121-201ENSMUST00000187086 406 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm20915-201ENSMUST00000191575 663 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm36994-201ENSMUST00000192941 492 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm37560-201ENSMUST00000194289 1000 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm18428-201ENSMUST00000194986 791 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm43812-202ENSMUST00000202701 581 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm5305-201ENSMUST00000204010 746 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim43cP86449 Gm44656-201ENSMUST00000208428 490 ntBASIC7.78□□□□□ -1.16
Trim43cP86449 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms