Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CiitaP79621 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.54□□□□□ -1.2
CiitaP79621 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.53□□□□□ -1.2
CiitaP79621 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
CiitaP79621 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CiitaP79621 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CiitaP79621 Snord88a-201ENSMUST00000116723 90 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Gm7571-201ENSMUST00000120252 927 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Gm12175-201ENSMUST00000122081 345 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC7.53□□□□□ -1.2
CiitaP79621 Gm26357-201ENSMUST00000158218 115 ntBASIC7.53□□□□□ -1.2
CiitaP79621 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.53□□□□□ -1.2
CiitaP79621 Gm36935-201ENSMUST00000192526 292 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.53□□□□□ -1.2
CiitaP79621 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.53□□□□□ -1.2
CiitaP79621 Gm2754-201ENSMUST00000223383 589 ntBASIC7.53□□□□□ -1.2
CiitaP79621 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.53□□□□□ -1.2
CiitaP79621 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.53□□□□□ -1.2
CiitaP79621 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.53□□□□□ -1.2
CiitaP79621 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 AW822073-201ENSMUST00000075305 555 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
CiitaP79621 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CiitaP79621 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CiitaP79621 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CiitaP79621 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.53□□□□□ -1.2
CiitaP79621 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.53□□□□□ -1.2
CiitaP79621 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CiitaP79621 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CiitaP79621 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
CiitaP79621 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CiitaP79621 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.52□□□□□ -1.2
CiitaP79621 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
CiitaP79621 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
CiitaP79621 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CiitaP79621 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CiitaP79621 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.52□□□□□ -1.21
CiitaP79621 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gm15349-201ENSMUST00000121154 204 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.52□□□□□ -1.21
CiitaP79621 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.52□□□□□ -1.21
CiitaP79621 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm9167-201ENSMUST00000182469 962 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm10136-201ENSMUST00000183196 435 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm5334-201ENSMUST00000187472 720 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm28117-201ENSMUST00000188472 371 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gm10416-201ENSMUST00000197379 645 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm20223-201ENSMUST00000199932 805 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gm43377-201ENSMUST00000201640 455 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm44896-201ENSMUST00000206190 772 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.52□□□□□ -1.21
CiitaP79621 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.52□□□□□ -1.21
CiitaP79621 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.52□□□□□ -1.21
CiitaP79621 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.52□□□□□ -1.21
CiitaP79621 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.52□□□□□ -1.21
CiitaP79621 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CiitaP79621 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CiitaP79621 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.52□□□□□ -1.21
CiitaP79621 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CiitaP79621 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms